Hierarchy For All Packages

Package Hierarchies:

com.aliasi.chunk, com.aliasi.classify, com.aliasi.cluster, com.aliasi.coref, com.aliasi.coref.matchers, com.aliasi.corpus, com.aliasi.corpus.parsers, com.aliasi.crf, com.aliasi.dca, com.aliasi.dict, com.aliasi.features, com.aliasi.hmm, com.aliasi.io, com.aliasi.lm, com.aliasi.matrix, com.aliasi.medline, com.aliasi.sentences, com.aliasi.spell, com.aliasi.stats, com.aliasi.symbol, com.aliasi.tag, com.aliasi.tokenizer, com.aliasi.util, com.aliasi.xml

Class Hierarchy

• java.lang.Object
  • com.aliasi.medline.Abstract
  • java.util.AbstractCollection<E> (implements java.util.Collection<E>)
    • java.util.AbstractList<E> (implements java.util.List<E>)
      • com.aliasi.util.Tuple<E>
    • java.util.AbstractSet<E> (implements java.util.Set<E>)
      • com.aliasi.dict.AbstractDictionary<C> (implements com.aliasi.util.Compilable, com.aliasi.dict.Dictionary<C>)
        • com.aliasi.dict.MapDictionary<C> (implements com.aliasi.util.Compilable, java.io.Serializable)
        • com.aliasi.dict.TrieDictionary<C> (implements com.aliasi.util.Compilable, java.io.Serializable)
      • com.aliasi.util.BoundedPriorityQueue<E> (implements com.aliasi.util.PriorityQueue<E>, java.util.Queue<E>, java.util.SortedSet<E>)
      • com.aliasi.util.CompactHashSet<E> (implements java.io.Serializable)
      • com.aliasi.util.ShortPriorityQueue<E> (implements java.util.Queue<E>, java.util.SortedSet<E>)
      • com.aliasi.util.SmallSet<E>
      • java.util.TreeSet<E> (implements java.lang.Cloneable, java.io.Serializable, java.util.SortedSet<E>)
        • com.aliasi.util.NBestSet<E>
    • com.aliasi.util.MinMaxHeap<E>
  • com.aliasi.util.AbstractCommand (implements java.lang.Runnable)
  • com.aliasi.stats.AbstractDiscreteDistribution (implements com.aliasi.stats.DiscreteDistribution)
    • com.aliasi.stats.BinomialDistribution
    • com.aliasi.stats.MultivariateDistribution
      • com.aliasi.stats.BernoulliDistribution
        • com.aliasi.stats.BernoulliConstant
        • com.aliasi.stats.BernoulliEstimator (implements com.aliasi.util.Compilable)
      • com.aliasi.stats.MultivariateConstant
      • com.aliasi.stats.MultivariateEstimator (implements java.io.Serializable)
    • com.aliasi.stats.PoissonDistribution
      • com.aliasi.stats.PoissonConstant
      • com.aliasi.stats.PoissonEstimator
    • com.aliasi.stats.ZipfDistribution
  • com.aliasi.util.AbstractExternalizable (implements java.io.Externalizable)
  • com.aliasi.cluster.AbstractHierarchicalClusterer<E> (implements com.aliasi.cluster.HierarchicalClusterer<E>)
    • com.aliasi.cluster.CompleteLinkClusterer<E>
    • com.aliasi.cluster.SingleLinkClusterer<E>
  • com.aliasi.hmm.AbstractHmm (implements com.aliasi.hmm.HiddenMarkovModel)
    • com.aliasi.hmm.AbstractHmmEstimator (implements com.aliasi.util.Compilable, com.aliasi.corpus.ObjectHandler<E>, com.aliasi.corpus.TagHandler)
      • com.aliasi.hmm.HmmCharLmEstimator
  • java.util.AbstractMap<K,V> (implements java.util.Map<K,V>)
    • com.aliasi.util.BinaryMap<E> (implements java.io.Serializable)
    • com.aliasi.util.FastCache<K,V> (implements java.io.Serializable)
    • com.aliasi.util.HardFastCache<K,V>
    • java.util.HashMap<K,V> (implements java.lang.Cloneable, java.util.Map<K,V>, java.io.Serializable)
      • com.aliasi.util.ObjectToCounterMap<E>
      • com.aliasi.util.ObjectToDoubleMap<E>
      • com.aliasi.util.ObjectToSet<K,M>
    • com.aliasi.util.SmallObjectToDoubleMap<E> (implements java.io.Serializable)
  • com.aliasi.matrix.AbstractMatrix (implements com.aliasi.matrix.Matrix)
    • com.aliasi.matrix.DenseMatrix
    • com.aliasi.matrix.ProximityMatrix
    • com.aliasi.matrix.SvdMatrix
  • com.aliasi.coref.AbstractMentionChain (implements com.aliasi.coref.MentionChain)
    • com.aliasi.coref.MentionChainImpl
  • com.aliasi.coref.AbstractMentionFactory (implements com.aliasi.coref.MentionFactory)
    • com.aliasi.coref.EnglishMentionFactory
  • com.aliasi.sentences.AbstractSentenceModel (implements com.aliasi.sentences.SentenceModel)
    • com.aliasi.sentences.HeuristicSentenceModel
      • com.aliasi.sentences.IndoEuropeanSentenceModel (implements java.io.Serializable)
      • com.aliasi.sentences.MedlineSentenceModel (implements java.io.Serializable)
  • com.aliasi.matrix.AbstractVector (implements com.aliasi.matrix.Vector)
    • com.aliasi.matrix.DenseVector (implements java.io.Serializable)
    • com.aliasi.matrix.SparseFloatVector (implements java.io.Serializable)
  • com.aliasi.features.AddFeatureExtractor<E> (implements com.aliasi.util.FeatureExtractor<E>, java.io.Serializable)
  • com.aliasi.stats.AnnealingSchedule
  • com.aliasi.dict.ApproxDictionaryChunker (implements com.aliasi.chunk.Chunker, java.io.Serializable)
  • com.aliasi.util.Arrays
  • com.aliasi.medline.Article
  • com.aliasi.medline.ArticleDate
  • com.aliasi.medline.Author
  • com.aliasi.medline.AuthorList (implements java.lang.Iterable<T>)
  • com.aliasi.spell.AutoCompleter (implements java.io.Serializable)
  • com.aliasi.classify.BaseClassifierEvaluator<E> (implements com.aliasi.corpus.ObjectHandler<E>)
    • com.aliasi.classify.RankedClassifierEvaluator<E>
      • com.aliasi.classify.ScoredClassifierEvaluator<E>
        • com.aliasi.classify.ConditionalClassifierEvaluator<E>
          • com.aliasi.classify.JointClassifierEvaluator<E>
  • com.aliasi.classify.BernoulliClassifier<E> (implements com.aliasi.corpus.ClassificationHandler<E,C>, com.aliasi.classify.Classifier<E,C>, com.aliasi.classify.JointClassifier<E>, com.aliasi.corpus.ObjectHandler<E>, java.io.Serializable)
  • com.aliasi.classify.BigVectorClassifier (implements com.aliasi.classify.Classifier<E,C>, com.aliasi.classify.ScoredClassifier<E>, java.io.Serializable)
  • com.aliasi.chunk.BioTagChunkCodec (implements java.io.Serializable)
  • com.aliasi.io.BitInput
  • com.aliasi.io.BitOutput
  • com.aliasi.lm.BitTrieReader (implements com.aliasi.lm.TrieReader)
  • com.aliasi.lm.BitTrieWriter (implements com.aliasi.lm.TrieWriter)
  • com.aliasi.coref.BooleanMatcherAdapter (implements com.aliasi.coref.Matcher)
    • com.aliasi.coref.matchers.EntityTypeMatch
    • com.aliasi.coref.matchers.ExactPhraseMatch
    • com.aliasi.coref.matchers.SequenceSubstringMatch
    • com.aliasi.coref.matchers.SynonymMatch
  • com.aliasi.coref.CachedMention (implements com.aliasi.coref.Mention)
  • com.aliasi.crf.ChainCrf<E> (implements com.aliasi.tag.MarginalTagger<E>, com.aliasi.tag.NBestTagger<E>, java.io.Serializable, com.aliasi.tag.Tagger<E>)
  • com.aliasi.crf.ChainCrfChunker (implements com.aliasi.chunk.Chunker, com.aliasi.chunk.ConfidenceChunker, com.aliasi.chunk.NBestChunker, java.io.Serializable)
  • com.aliasi.crf.ChainCrfFeatures<E>
  • com.aliasi.tokenizer.CharacterTokenCategorizer (implements com.aliasi.tokenizer.TokenCategorizer)
  • com.aliasi.tokenizer.CharacterTokenizerFactory (implements com.aliasi.util.Compilable, java.io.Serializable, com.aliasi.tokenizer.TokenizerFactory)
  • com.aliasi.lm.CharSeqMultiCounter (implements com.aliasi.lm.CharSeqCounter)
  • com.aliasi.medline.Chemical
  • com.aliasi.chunk.ChunkAndCharSeq (implements com.aliasi.util.Scored)
  • com.aliasi.chunk.ChunkerEvaluator (implements com.aliasi.corpus.ObjectHandler<E>, com.aliasi.corpus.TagHandler)
  • com.aliasi.features.ChunkerFeatureExtractor (implements com.aliasi.util.FeatureExtractor<E>, java.io.Serializable)
  • com.aliasi.chunk.ChunkFactory
  • com.aliasi.corpus.ChunkHandlerAdapter (implements com.aliasi.corpus.ObjectHandler<E>)
  • com.aliasi.chunk.ChunkingEvaluation
  • com.aliasi.chunk.ChunkingImpl (implements com.aliasi.chunk.Chunking, java.lang.Iterable<T>)
  • com.aliasi.corpus.ChunkTagHandlerAdapter (implements com.aliasi.corpus.TagHandler)
  • com.aliasi.classify.Classification
    • com.aliasi.classify.RankedClassification
      • com.aliasi.classify.ScoredClassification
        • com.aliasi.classify.ConditionalClassification
          • com.aliasi.classify.JointClassification
  • com.aliasi.classify.Classified<E>
    • com.aliasi.classify.RankedClassified<E>
  • com.aliasi.classify.ClassifierEvaluator<E,C> (implements com.aliasi.corpus.ClassificationHandler<E,C>, com.aliasi.corpus.ObjectHandler<E>)
  • com.aliasi.cluster.ClusterScore<E>
  • com.aliasi.util.Collections
  • com.aliasi.util.CommaSeparatedValues (implements java.io.Serializable)
  • com.aliasi.medline.CommentOrCorrection
  • com.aliasi.lm.CompiledNGramBoundaryLM (implements com.aliasi.lm.LanguageModel.Conditional, com.aliasi.lm.LanguageModel.Sequence, com.aliasi.stats.Model<E>)
  • com.aliasi.lm.CompiledNGramProcessLM (implements com.aliasi.lm.LanguageModel.Conditional, com.aliasi.lm.LanguageModel.Process, com.aliasi.stats.Model<E>)
  • com.aliasi.spell.CompiledSpellChecker (implements com.aliasi.spell.SpellChecker)
  • com.aliasi.lm.CompiledTokenizedLM (implements com.aliasi.lm.LanguageModel.Sequence, com.aliasi.lm.LanguageModel.Tokenized)
  • com.aliasi.classify.ConfusionMatrix
  • com.aliasi.corpus.Corpus<H>
    • com.aliasi.corpus.DiskCorpus<H>
    • com.aliasi.corpus.ListCorpus<E> (implements java.io.Serializable)
    • com.aliasi.classify.XValidatingClassificationCorpus<E> (implements com.aliasi.corpus.ClassificationHandler<E,C>)
    • com.aliasi.corpus.XValidatingObjectCorpus<E> (implements com.aliasi.corpus.ObjectHandler<E>, java.io.Serializable)
  • com.aliasi.matrix.CosineDistance (implements com.aliasi.util.Proximity<E>, java.io.Serializable)
  • com.aliasi.medline.DataBank
  • com.aliasi.medline.DataBankList (implements java.lang.Iterable<T>)
  • org.xml.sax.helpers.DefaultHandler (implements org.xml.sax.ContentHandler, org.xml.sax.DTDHandler, org.xml.sax.EntityResolver, org.xml.sax.ErrorHandler)
    • com.aliasi.xml.SimpleElementHandler
      • com.aliasi.xml.DelegateHandler
      • com.aliasi.xml.DelegatingHandler
      • com.aliasi.xml.SAXFilterHandler
        • com.aliasi.xml.CompositeFilter
        • com.aliasi.xml.ElementStackFilter
          • com.aliasi.xml.TextContentFilter
            • com.aliasi.sentences.SentenceAnnotateFilter
          • com.aliasi.xml.WellFormedFilter
        • com.aliasi.xml.GroupCharactersFilter
        • com.aliasi.xml.RemoveElementsFilter
        • com.aliasi.xml.SAXWriterFilter
      • com.aliasi.xml.SAXWriter
        • com.aliasi.xml.XHtmlWriter
    • com.aliasi.xml.TextAccumulatorHandler
  • com.aliasi.cluster.Dendrogram<E> (implements com.aliasi.util.Scored)
    • com.aliasi.cluster.LeafDendrogram<E>
    • com.aliasi.cluster.LinkDendrogram<E>
  • com.aliasi.dict.DictionaryEntry<C> (implements com.aliasi.util.Compilable, com.aliasi.util.Scored)
  • com.aliasi.dca.DiscreteChooser (implements java.io.Serializable)
  • com.aliasi.dca.DiscreteObjectChooser<E> (implements java.io.Serializable)
  • com.aliasi.matrix.DotProductKernel (implements com.aliasi.matrix.KernelFunction, java.io.Serializable)
  • com.aliasi.spell.EditDistance (implements com.aliasi.util.Distance<E>, com.aliasi.util.Proximity<E>)
  • com.aliasi.medline.ELocationId
  • com.aliasi.matrix.EuclideanDistance (implements com.aliasi.util.Distance<E>, java.io.Serializable)
  • com.aliasi.dict.ExactDictionaryChunker (implements com.aliasi.chunk.Chunker)
  • com.aliasi.util.Exceptions
  • com.aliasi.features.FeatureExtractorFilter<E> (implements com.aliasi.util.FeatureExtractor<E>)
    • com.aliasi.features.CacheFeatureExtractor<E> (implements java.io.Serializable)
    • com.aliasi.features.LengthNormFeatureExtractor<E> (implements java.io.Serializable)
    • com.aliasi.features.ModifiedFeatureExtractor<E> (implements com.aliasi.util.FeatureExtractor<E>)
      • com.aliasi.features.BoundedFeatureExtractor<E> (implements java.io.Serializable)
      • com.aliasi.features.KnownFeatureExtractor<E> (implements java.io.Serializable)
    • com.aliasi.features.ZScoreFeatureExtractor<E> (implements java.io.Serializable)
  • com.aliasi.features.Features
  • com.aliasi.io.FileNameFilter (implements java.io.FileFilter)
    • com.aliasi.io.FileExtensionFilter
  • com.aliasi.util.Files
  • com.aliasi.util.FilterComparator<E> (implements java.util.Comparator<T>)
    • com.aliasi.util.ReversibleComparator<E>
  • com.aliasi.matrix.GaussianRadialBasisKernel (implements com.aliasi.matrix.KernelFunction, java.io.Serializable)
  • com.aliasi.coref.matchers.GenderKiller (implements com.aliasi.coref.Killer)
  • com.aliasi.medline.GeneralNote
  • com.aliasi.medline.Grant
  • com.aliasi.medline.GrantList (implements java.lang.Iterable<T>)
  • com.aliasi.chunk.HmmChunker (implements com.aliasi.chunk.ConfidenceChunker, com.aliasi.chunk.NBestChunker)
    • com.aliasi.chunk.CharLmHmmChunker (implements com.aliasi.util.Compilable, com.aliasi.corpus.ObjectHandler<E>, com.aliasi.corpus.TagHandler)
  • com.aliasi.hmm.HmmDecoder (implements com.aliasi.tag.MarginalTagger<E>, com.aliasi.tag.NBestTagger<E>, com.aliasi.tag.Tagger<E>)
  • com.aliasi.hmm.HmmEvaluation
  • com.aliasi.hmm.HmmEvaluator (implements com.aliasi.corpus.TagHandler)
  • com.aliasi.coref.matchers.HonorificConflictKiller (implements com.aliasi.coref.Killer)
  • com.aliasi.matrix.HyperbolicTangentKernel (implements com.aliasi.matrix.KernelFunction, java.io.Serializable)
  • com.aliasi.tokenizer.IndoEuropeanTokenCategorizer (implements com.aliasi.util.Compilable, com.aliasi.tokenizer.TokenCategorizer)
  • com.aliasi.tokenizer.IndoEuropeanTokenizerFactory (implements com.aliasi.util.Compilable, java.io.Serializable, com.aliasi.tokenizer.TokenizerFactory)
  • com.aliasi.features.InteractionFeatureExtractor<E> (implements com.aliasi.util.FeatureExtractor<E>, java.io.Serializable)
  • com.aliasi.medline.Investigator
  • com.aliasi.chunk.IoTagChunkCodec (implements java.io.Serializable)
  • com.aliasi.util.Iterators
  • com.aliasi.util.Iterators.Array<E> (implements java.util.Iterator<E>)
  • com.aliasi.util.Iterators.ArraySlice<E> (implements java.util.Iterator<E>)
  • com.aliasi.util.Iterators.Buffered<E> (implements java.util.Iterator<E>)
  • com.aliasi.util.Iterators.Empty<E> (implements java.util.Iterator<E>)
  • com.aliasi.util.Iterators.Filter<E> (implements java.util.Iterator<E>)
  • com.aliasi.util.Iterators.Modifier<E> (implements java.util.Iterator<E>)
  • com.aliasi.util.Iterators.Pair<E> (implements java.util.Iterator<E>)
  • com.aliasi.util.Iterators.PrimitiveInt (implements java.util.Iterator<E>)
  • com.aliasi.util.Iterators.Sequence<E> (implements java.util.Iterator<E>)
  • com.aliasi.util.Iterators.Singleton<E> (implements java.util.Iterator<E>)
  • com.aliasi.spell.JaroWinklerDistance (implements com.aliasi.util.Distance<E>, com.aliasi.util.Proximity<E>)
  • com.aliasi.medline.Journal
  • com.aliasi.medline.JournalInfo
  • com.aliasi.medline.JournalIssue
  • com.aliasi.medline.KeywordList (implements java.lang.Iterable<T>)
  • com.aliasi.cluster.KMeansClusterer<E> (implements com.aliasi.cluster.Clusterer<E>)
  • com.aliasi.classify.KnnClassifier<E> (implements com.aliasi.corpus.ClassificationHandler<E,C>, com.aliasi.classify.Classifier<E,C>, com.aliasi.util.Compilable, com.aliasi.corpus.ObjectHandler<E>, com.aliasi.classify.ScoredClassifier<E>, java.io.Serializable)
  • com.aliasi.cluster.LatentDirichletAllocation (implements java.io.Serializable)
  • com.aliasi.cluster.LatentDirichletAllocation.GibbsSample
  • com.aliasi.classify.LMClassifier<L,M> (implements com.aliasi.classify.Classifier<E,C>, com.aliasi.classify.JointClassifier<E>)
    • com.aliasi.classify.DynamicLMClassifier<L> (implements com.aliasi.corpus.ClassificationHandler<E,C>, com.aliasi.util.Compilable, com.aliasi.corpus.ObjectHandler<E>)
      • com.aliasi.classify.BinaryLMClassifier
      • com.aliasi.classify.NaiveBayesClassifier
  • com.aliasi.stats.LogisticRegression (implements com.aliasi.util.Compilable, java.io.Serializable)
  • com.aliasi.classify.LogisticRegressionClassifier<E> (implements com.aliasi.classify.Classifier<E,C>, com.aliasi.util.Compilable, com.aliasi.classify.ConditionalClassifier<E>, java.io.Serializable)
  • com.aliasi.symbol.MapSymbolTable (implements com.aliasi.util.Compilable, java.io.Serializable, com.aliasi.symbol.SymbolTable)
  • com.aliasi.tag.MarginalTaggerEvaluator<E> (implements com.aliasi.corpus.ObjectHandler<E>)
  • com.aliasi.util.Math
  • com.aliasi.matrix.Matrices
  • com.aliasi.medline.MedlineChars
  • com.aliasi.medline.MedlineCitation
  • com.aliasi.medline.MedlineCitationSet
  • com.aliasi.medline.MeshHeading
  • com.aliasi.matrix.MinkowskiDistance (implements com.aliasi.util.Distance<E>, java.io.Serializable)
  • com.aliasi.tokenizer.ModifiedTokenizerFactory (implements com.aliasi.tokenizer.TokenizerFactory)
    • com.aliasi.tokenizer.ModifyTokenTokenizerFactory (implements java.io.Serializable)
      • com.aliasi.tokenizer.LowerCaseTokenizerFactory (implements java.io.Serializable)
      • com.aliasi.tokenizer.PorterStemmerTokenizerFactory (implements java.io.Serializable)
      • com.aliasi.tokenizer.RegExFilteredTokenizerFactory (implements java.io.Serializable)
      • com.aliasi.tokenizer.SoundexTokenizerFactory (implements java.io.Serializable)
      • com.aliasi.tokenizer.StopTokenizerFactory (implements java.io.Serializable)
        • com.aliasi.tokenizer.EnglishStopTokenizerFactory (implements java.io.Serializable)
      • com.aliasi.tokenizer.TokenLengthTokenizerFactory (implements java.io.Serializable)
      • com.aliasi.tokenizer.WhitespaceNormTokenizerFactory (implements java.io.Serializable)
  • com.aliasi.stats.MultinomialDistribution
  • com.aliasi.lm.MultiTrieReader (implements com.aliasi.lm.TrieReader)
  • com.aliasi.medline.Name
  • com.aliasi.medline.NameId
  • com.aliasi.tag.NBestTaggerEvaluator<E> (implements com.aliasi.corpus.ObjectHandler<E>)
  • com.aliasi.lm.NGramBoundaryLM (implements com.aliasi.lm.LanguageModel.Conditional, com.aliasi.lm.LanguageModel.Dynamic, com.aliasi.lm.LanguageModel.Sequence, com.aliasi.stats.Model<E>, com.aliasi.corpus.TextHandler)
  • com.aliasi.lm.NGramProcessLM (implements com.aliasi.lm.LanguageModel.Conditional, com.aliasi.lm.LanguageModel.Dynamic, com.aliasi.lm.LanguageModel.Process, com.aliasi.stats.Model<E>, com.aliasi.corpus.ObjectHandler<E>, java.io.Serializable, com.aliasi.corpus.TextHandler)
  • com.aliasi.tokenizer.NGramTokenizerFactory (implements com.aliasi.util.Compilable, java.io.Serializable, com.aliasi.tokenizer.TokenizerFactory)
  • java.lang.Number (implements java.io.Serializable)
    • com.aliasi.util.Counter
  • com.aliasi.stats.OnlineNormalEstimator
  • com.aliasi.medline.OtherAbstract
  • com.aliasi.medline.OtherID
  • com.aliasi.util.Pair<A,B>
  • com.aliasi.corpus.Parser<H>
    • com.aliasi.corpus.InputSourceParser<H>
      • com.aliasi.corpus.LineParser<H>
        • com.aliasi.corpus.parsers.SvmLightClassificationParser
      • com.aliasi.corpus.XMLParser<H>
        • com.aliasi.corpus.parsers.GeniaEntityChunkParser
        • com.aliasi.corpus.parsers.GeniaSentenceParser
        • com.aliasi.medline.MedlineParser
        • com.aliasi.corpus.parsers.MedlineTextParser
        • com.aliasi.corpus.parsers.Muc6ChunkParser
    • com.aliasi.corpus.StringParser<H>
      • com.aliasi.corpus.parsers.AbstractMedTagParser
        • com.aliasi.corpus.parsers.GeneTagParser
        • com.aliasi.corpus.parsers.MedPostPosParser
      • com.aliasi.corpus.parsers.BrownPosParser
      • com.aliasi.corpus.parsers.BrownTextParser
      • com.aliasi.corpus.parsers.GeneTagChunkParser
      • com.aliasi.corpus.parsers.GeniaPosParser
      • com.aliasi.corpus.parsers.GigawordTextParser
      • com.aliasi.tag.LineTaggingParser
      • com.aliasi.corpus.parsers.RegexLineTagParser
      • com.aliasi.corpus.parsers.Reuters21578Parser
  • com.aliasi.classify.PerceptronClassifier<E> (implements com.aliasi.classify.Classifier<E,C>, com.aliasi.classify.ScoredClassifier<E>, java.io.Serializable)
  • com.aliasi.medline.PersonalNameSubject
  • com.aliasi.matrix.PolynomialKernel (implements com.aliasi.matrix.KernelFunction, java.io.Serializable)
  • com.aliasi.tokenizer.PorterStemmer
  • com.aliasi.stats.PotentialScaleReduction
  • com.aliasi.classify.PrecisionRecallEvaluation
  • com.aliasi.features.PrefixedFeatureExtractor<E> (implements com.aliasi.util.FeatureExtractor<E>, java.io.Serializable)
  • com.aliasi.lm.PruneTrieReader
  • com.aliasi.medline.PubDate
  • java.io.Reader (implements java.io.Closeable, java.lang.Readable)
    • java.io.BufferedReader
      • java.io.LineNumberReader
        • com.aliasi.io.FileLineReader (implements java.lang.Iterable<T>)
  • com.aliasi.util.Reflection
  • com.aliasi.chunk.RegExChunker (implements com.aliasi.chunk.Chunker, com.aliasi.util.Compilable, java.io.Serializable)
  • com.aliasi.tokenizer.RegExTokenizerFactory (implements com.aliasi.util.Compilable, java.io.Serializable, com.aliasi.tokenizer.TokenizerFactory)
    • com.aliasi.tokenizer.LineTokenizerFactory
  • com.aliasi.stats.RegressionPrior (implements java.io.Serializable)
  • com.aliasi.io.Reporter
  • com.aliasi.io.Reporters
  • com.aliasi.chunk.RescoringChunker<B> (implements com.aliasi.chunk.ConfidenceChunker, com.aliasi.chunk.NBestChunker)
    • com.aliasi.chunk.AbstractCharLmRescoringChunker<B,O,C>
      • com.aliasi.chunk.CharLmRescoringChunker (implements com.aliasi.util.Compilable, com.aliasi.corpus.ObjectHandler<E>, com.aliasi.corpus.TagHandler)
  • com.aliasi.util.ReversibleMTFListComparator<E> (implements java.util.Comparator<T>)
  • com.aliasi.lm.ScaleTrieReader
  • com.aliasi.util.ScoredObject<E> (implements com.aliasi.util.Scored)
  • com.aliasi.classify.ScoredPrecisionRecallEvaluation
  • com.aliasi.sentences.SentenceChunker (implements com.aliasi.chunk.Chunker, java.io.Serializable)
  • com.aliasi.sentences.SentenceEvaluation
  • com.aliasi.sentences.SentenceEvaluator (implements com.aliasi.corpus.ObjectHandler<E>)
  • com.aliasi.util.Sgml
  • com.aliasi.spell.SpellEvaluator
  • com.aliasi.stats.Statistics
  • com.aliasi.util.Streams
  • com.aliasi.features.StringLengthFeatureExtractor (implements com.aliasi.util.FeatureExtractor<E>, java.io.Serializable)
  • com.aliasi.util.Strings
  • com.aliasi.symbol.SymbolTableCompiler (implements com.aliasi.util.Compilable, com.aliasi.symbol.SymbolTable)
  • com.aliasi.chunk.TagChunkCodecAdapters
  • com.aliasi.tag.TaggerEvaluator<E> (implements com.aliasi.corpus.ObjectHandler<E>)
  • com.aliasi.tag.Tagging<E>
    • com.aliasi.tag.ScoredTagging<E> (implements com.aliasi.util.Scored)
    • com.aliasi.tag.StringTagging
  • com.aliasi.tag.TagLattice<E>
    • com.aliasi.crf.ForwardBackwardTagLattice<E>
    • com.aliasi.hmm.TagWordLattice
  • com.aliasi.matrix.TaxicabDistance (implements com.aliasi.util.Distance<E>, java.io.Serializable)
  • com.aliasi.classify.TfIdfClassifierTrainer<E> (implements com.aliasi.corpus.ClassificationHandler<E,C>, com.aliasi.util.Compilable, com.aliasi.corpus.ObjectHandler<E>, java.io.Serializable)
  • com.aliasi.tokenizer.TokenChunker (implements com.aliasi.chunk.Chunker, java.io.Serializable)
  • com.aliasi.tokenizer.TokenFeatureExtractor (implements com.aliasi.util.FeatureExtractor<E>, java.io.Serializable)
  • com.aliasi.tokenizer.Tokenization (implements java.io.Serializable)
  • com.aliasi.spell.TokenizedDistance (implements com.aliasi.util.Distance<E>, com.aliasi.util.Proximity<E>)
    • com.aliasi.spell.JaccardDistance
    • com.aliasi.spell.TfIdfDistance (implements com.aliasi.corpus.TextHandler)
  • com.aliasi.lm.TokenizedLM (implements com.aliasi.lm.LanguageModel.Dynamic, com.aliasi.lm.LanguageModel.Sequence, com.aliasi.lm.LanguageModel.Tokenized, com.aliasi.corpus.ObjectHandler<E>, com.aliasi.corpus.TextHandler)
  • com.aliasi.tokenizer.Tokenizer (implements java.lang.Iterable<T>)
    • com.aliasi.tokenizer.FilterTokenizer
      • com.aliasi.tokenizer.NormalizeWhiteSpaceFilterTokenizer
      • com.aliasi.tokenizer.SoundexFilterTokenizer
      • com.aliasi.tokenizer.StopFilterTokenizer
        • com.aliasi.tokenizer.LengthStopFilterTokenizer
        • com.aliasi.tokenizer.PunctuationStopListTokenizer
        • com.aliasi.tokenizer.StopListFilterTokenizer
          • com.aliasi.tokenizer.EnglishStopListFilterTokenizer
      • com.aliasi.tokenizer.TokenFilterTokenizer
        • com.aliasi.tokenizer.LowerCaseFilterTokenizer
        • com.aliasi.tokenizer.PorterStemmerFilterTokenizer
  • com.aliasi.chunk.TokenShapeChunker (implements com.aliasi.chunk.Chunker)
  • com.aliasi.medline.Topic
  • com.aliasi.classify.TradNaiveBayesClassifier (implements com.aliasi.corpus.ClassificationHandler<E,C>, com.aliasi.classify.Classifier<E,C>, com.aliasi.util.Compilable, com.aliasi.classify.JointClassifier<E>, com.aliasi.corpus.ObjectHandler<E>, java.io.Serializable)
  • com.aliasi.spell.TrainSpellChecker (implements com.aliasi.util.Compilable, com.aliasi.corpus.ObjectHandler<E>, java.io.Serializable, com.aliasi.corpus.TextHandler)
  • com.aliasi.chunk.TrainTokenShapeChunker (implements com.aliasi.util.Compilable, com.aliasi.corpus.ObjectHandler<E>, com.aliasi.corpus.TagHandler)
  • com.aliasi.lm.TrieCharSeqCounter (implements com.aliasi.lm.CharSeqCounter)
  • com.aliasi.lm.TrieIntSeqCounter (implements com.aliasi.lm.IntSeqCounter)
  • com.aliasi.lm.UniformBoundaryLM (implements com.aliasi.lm.LanguageModel.Dynamic, com.aliasi.lm.LanguageModel.Sequence)
  • com.aliasi.lm.UniformProcessLM (implements com.aliasi.lm.LanguageModel.Dynamic, com.aliasi.lm.LanguageModel.Process)
  • com.aliasi.spell.WeightedEditDistance (implements com.aliasi.util.Distance<E>, com.aliasi.util.Proximity<E>)
    • com.aliasi.spell.FixedWeightEditDistance (implements com.aliasi.util.Compilable, java.io.Serializable)
  • com.aliasi.coref.WithinDocCoref
  • com.aliasi.util.XML

Interface Hierarchy

• com.aliasi.classify.BaseClassifier<E>
  • com.aliasi.classify.ConditionalClassifier<E>
    • com.aliasi.classify.JointClassifier<E>
  • com.aliasi.classify.JointClassifier<E>
  • com.aliasi.classify.RankedClassifier<E>
    • com.aliasi.classify.ConditionalClassifier<E>
      • com.aliasi.classify.JointClassifier<E>
    • com.aliasi.classify.JointClassifier<E>
    • com.aliasi.classify.ScoredClassifier<E>
      • com.aliasi.classify.ConditionalClassifier<E>
        • com.aliasi.classify.JointClassifier<E>
      • com.aliasi.classify.JointClassifier<E>
  • com.aliasi.classify.ScoredClassifier<E>
    • com.aliasi.classify.ConditionalClassifier<E>
      • com.aliasi.classify.JointClassifier<E>
    • com.aliasi.classify.JointClassifier<E>
• com.aliasi.crf.ChainCrfFeatureExtractor<E>
• com.aliasi.lm.CharSeqCounter
• com.aliasi.chunk.Chunker
  • com.aliasi.chunk.NBestChunker
• com.aliasi.chunk.Chunking
• com.aliasi.classify.Classifier<E,C>
• com.aliasi.cluster.Clusterer<E>
  • com.aliasi.cluster.HierarchicalClusterer<E>
• com.aliasi.util.Compilable
  • com.aliasi.lm.LanguageModel.Dynamic (also extends com.aliasi.lm.LanguageModel)
• com.aliasi.chunk.ConfidenceChunker
• com.aliasi.stats.DiscreteDistribution
• com.aliasi.util.Distance<E>
• com.aliasi.util.Factory<E>
• com.aliasi.util.FeatureExtractor<E>
• com.aliasi.corpus.Handler
  • com.aliasi.corpus.ChunkHandler
  • com.aliasi.corpus.ClassificationHandler<E,C>
  • com.aliasi.corpus.IntArrayHandler
  • com.aliasi.medline.MedlineHandler
  • com.aliasi.corpus.ObjectHandler<E>
    • com.aliasi.corpus.ChunkHandler
    • com.aliasi.corpus.IntArrayHandler
    • com.aliasi.medline.MedlineHandler
    • com.aliasi.corpus.StringArrayHandler
  • com.aliasi.corpus.StringArrayHandler
  • com.aliasi.corpus.TagHandler
  • com.aliasi.corpus.TextHandler
• com.aliasi.hmm.HiddenMarkovModel
• com.aliasi.lm.IntSeqCounter
• java.lang.Iterable<T>
  • java.util.Collection<E>
    • com.aliasi.util.PriorityQueue<E>
    • java.util.Set<E>
      • com.aliasi.dict.Dictionary<C>
• com.aliasi.coref.Killer
• com.aliasi.lm.LanguageModel
  • com.aliasi.lm.LanguageModel.Conditional
  • com.aliasi.lm.LanguageModel.Dynamic (also extends com.aliasi.util.Compilable)
  • com.aliasi.lm.LanguageModel.Process
  • com.aliasi.lm.LanguageModel.Sequence
  • com.aliasi.lm.LanguageModel.Tokenized
• com.aliasi.tag.MarginalTagger<E>
• com.aliasi.coref.Matcher
• com.aliasi.matrix.Matrix
• com.aliasi.coref.Mention
• com.aliasi.coref.MentionChain
• com.aliasi.coref.MentionFactory
• com.aliasi.stats.Model<E>
• com.aliasi.util.Proximity<E>
  • com.aliasi.matrix.KernelFunction
• com.aliasi.util.Scored
  • com.aliasi.chunk.Chunk
• com.aliasi.sentences.SentenceModel
• com.aliasi.spell.SpellChecker
• com.aliasi.symbol.SymbolTable
• com.aliasi.chunk.TagChunkCodec
• com.aliasi.tag.Tagger<E>
  • com.aliasi.tag.NBestTagger<E>
• com.aliasi.tokenizer.TokenCategorizer
• com.aliasi.tokenizer.TokenizerFactory
• com.aliasi.lm.TrieReader
• com.aliasi.lm.TrieWriter
• com.aliasi.matrix.Vector

Enum Hierarchy

• java.lang.Object
  • java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
    • com.aliasi.io.LogLevel